 
          Starting from Scratch or from a SIM Method
        
        
          AutoSRM assists and automates much of the process of
        
        
          creating SRM transitions from the beginning. If you
        
        
          already have a SIM method as a starting point, the process
        
        
          is even faster. Figure 2 shows a collision energy
        
        
          optimization curve for 1, 2-trichlorobenzene obtained
        
        
          using AutoSRM. From here, simply export your optimized
        
        
          transition list to the instrument method, and you are
        
        
          ready to run. For more details on how AutoSRM assists in
        
        
          SRM development see
        
        
          
            Application Brief AB52298:
          
        
        
          
            Introducing AutoSRM.
          
        
        
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          AB52297_E 05/12S
        
        
          Application Brief 52297
        
        
          Figure 4. Building a method using TraceFinder software. Simply
        
        
          select the compounds to acquire and both acquisition list and
        
        
          processing methods are created for you.
        
        
          Making Retention Time Adjustments
        
        
          To make minor retention time adjustments, run a standard
        
        
          and you are ready to run samples. Retention time
        
        
          adjustments that are made in data review are pushed back
        
        
          to your timed acquisition method, simplifying method
        
        
          maintenance. For more details on how the TSQ 8000
        
        
          instrument method can be synced to TraceFinder software,
        
        
          see
        
        
          
            Application Brief AB52300: TSQ 8000 GC-MS/MS
          
        
        
          
            Method Sync.
          
        
        
          Figure 3. Timed-SRM acquisition list as seen in the TSQ 8000
        
        
          instrument method. If you already know your SRM transitions,
        
        
          you can import the list using common industry method formats
        
        
          or from a spreadsheet. The compound name is listed on the left
        
        
          side of the bar. The white section in the middle of the bar indicates
        
        
          the expected peak width. The left portion of the bar indicates
        
        
          the acquisition time before peak elution, and the right portion
        
        
          indicates the acquisition time after peak elution. Flexible settings
        
        
          for tailing peaks are possible.
        
        
          Thermo Fisher
        
        
          Scientific,Austin,TX
        
        
          USA is ISO Certified.
        
        
          Figure 2. SRM collision energy optimization curve obtained using
        
        
          AutoSRM for 1, 2, 3 tricholobenzene.
        
        
          Starting from an SRM Method
        
        
          If you already have an SRM method, you can import your
        
        
          transition list into a TSQ 8000 instrument method either
        
        
          from a supported instrument method type or from a
        
        
          spreadsheet with your transition list. The transition list
        
        
          can then be exported to TraceFinder
        
        
          ™
        
        
          software for
        
        
          processing setup or to AutoSRM for further optimization.
        
        
          Figure 3 shows a timed acquisition list in the TSQ 8000
        
        
          instrument method. For details on the instrument method,
        
        
          see
        
        
          
            Application Brief AB52299: The TSQ 8000 Triple
          
        
        
          
            Quadrupole GC-MS/MS Instrument Method
          
        
        
          .
        
        
          Starting from Compound Data Store
        
        
          If you already have a database of SRMs in TraceFinder
        
        
          software, simply choose your compound list, as shown in
        
        
          Figure 4. That’s it! TraceFinder software will create your
        
        
          acquisition list and processing method from your selection.