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2

A toxic cyanobacterial bloom usually consists of multiple

microcystin congeners in varying concentrations. Several

techniques for the analysis of microcystins have been

developed. Mouse bioassays, protein phosphatase

inhibition assays, and enzyme-linked immunosorbent

assays (ELISA) are effective for rapid screening but lack

specificity. Reversed-phase high-performance liquid

chromatography (HPLC) with ultraviolet (UV) detection

is the most common approach used for the separation,

detection and quantitation of microcystins. An ISO

method for microcystin analysis by HPLC-UV has been

validated for MC-RR, MC-YR and MC-LR.

4

However,

UV detection is susceptible to interferences from water

matrices and requires sample cleanup and concentration

to achieve desirable detection limits. Furthermore, UV-based

methods do not provide unequivocal identification of

known microcystins nor enable identification of unexpected

variants. Liquid chromatography in combination with

multi-stage mass spectrometry (LC-MS

n

) enables structural

characterization and unambiguous identification of trace

levels of microcystins. LC-MS/MS in multiple reaction

monitoring (MRM) acquisition mode allows highly selective

and sensitive quantitation and confirmation of target

microcystins, but this approach requires extensive

compound-dependent parameter optimization and cannot

be used to detect unexpected toxins. Full-scan MS/MS

approaches obviate the need for compound optimization

and enable determination of all microcystins present in a

sample.

The Thermo Scientific Velos Pro dual-pressure linear ion

trap mass spectrometer delivers sensitivity and speed for

qualitative and quantitative applications. High-quality

full-scan MS

n

spectra enable confident structural

elucidation and identification. Rapid scanning and fast

cycle times generate more scans across chromatographic

peaks for robust quantitation and allow the acquisition of

more MS

n

spectra in shorter chromatographic runs. A

wide dynamic range of up to six orders of magnitude

facilitates identification and quantitation of low-abundance

compounds in complex matrices. Complementary

fragmentation techniques may be performed in parallel to

enable more MS

n

information to be obtained from a single

sample. In this application note, we describe a simple and

sensitive targeted full-scan LC-MS/MS method for the

identification and quantitation of the microcystins MC-RR,

MC-YR, and MC-LR using the Velos Pro

ion trap mass

spectrometer coupled to a Thermo Scientific Dionex

UltiMate 3000 x2 Dual RSLC system.

Experimental

Sample Preparation

MC-RR, MC-YR and MC-LR standards were purchased

from Sigma-Aldrich®. A stock solution of a mixture of

these three microcystins was prepared at a concentration

of 5 µg/mL. Calibration solutions, with concentrations of

0.025 µg/L to 50 µg/L, were prepared by serial dilution

of the stock solution.

LC-MS/MS Analysis

A 50 µL sample was injected on a Thermo Scientific

Acclaim 120 guard cartridge with 150 L/min, washed for

two minutes to waste and then eluted onto a Thermo

Scientific PepMap100 analytical column for separation.

LC-MS/MS analysis was performed on an UltiMate

3000 x2 Dual RSLC system coupled to an Velos Pro mass

spectrometer.

LC Parameters

Guard cartridge:

Acclaim

120 C18 (10 x 3.0 mm i.d., 5.0 µm

particle size, 120 Å pore size)

Analytical column:

Acclaim PepMap100 C18 (150 x 1.0 mm i.d.,

3.0 µm particle size, 100 Å pore size)

Mobile Phase A:

Water containing 0.1% formic acid

Mobile Phase B:

Acetonitrile containing 0.1% formic acid

Column temperature:

40 °C

Sample injection volume: 50 µL

Flow rate:

150 µL/min

Gradient:

Table 1

Table 1: LC Gradient

MS Parameters

Ionization mode:

Positive electrospray ionization (ESI)

Collision energy:

35%

Isolation window:

2

Targeted full-scan MC-RR [M+2H]

2+

at

m/z

520 [

m/z

150-1100]

MS/MS:

MC-YR [M+H]

+

at

m/z

1045 [

m/z

285-1100]

MC-LR [M+H]

+

at

m/z

995 [

m/z

285-1100]

Time

% A

% B

0.1

98

2

1.5

98

2

2.0

80

20

3.0

60

40

7.4

40

60

7.5

2

98

7.9

2

98